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Research Laboratory «Molecular Immunology»

Contract number
075-15-2021-600
Time span of the project
2021-2023
Head of the laboratory

As of 01.12.2023

22
Number of staff members
17
scientific publications
1
Objects of intellectual property
General information
Name of the project: mTOR1 regulation in the process of mitochondrial metabolism: the impact on inflammation and carcinogenesis


Goals and objectives

Goals of project:

The goal of this project is the study of the impact of metabolic reprogramming of mitochondria on the function of macrophage in the immune response to cancer cells in carcinogenesis, as well as to parasitic infection in translational medicine.

Project objective:

 In relation to this, the following tasks have been set:

  1. To research the role of mitochondria in metabolic reprogramming of macrophage in vivo;
  2. To study the impact of mitochondrial adaptations on the functional properties and the polarisation of macrophage both in vitro and in vivo;
  3. To forecast the composition of a hypothetical signalling pathway binding mitochondria and mTORC1 activity;
  4. To determine a possible role of mitochondrial adaptations in metabolic and functional rearrangements in cancer cells using corresponding animal models.

The supposed new connection between mitochondria and mTORC1 activity is a general regulatory mechanism that is necessary for the functional adaptation of cells. In this project, the focus is laid on immune reactions and oncogenesis.

The practical value of the study

Scientific results:

The effect of mitochondrial adaptations on the functional properties and polarization of macrophages was established. All tested drugs oligomycin, rotenone, didanosine, antinomycin A, FCCP prevented the polarization of macrophages to pro-oncogenic M2 polarization. It was revealed that induced mitochondrial dysfunction in macrophages prevents pro-oncogenic activation of tumor-associated macrophages during oncogenesis.

M2 polarization macrophages demonstrated increased levels of Raptor/mTOR and LAMP2/mTOR co-localization, which confirms increased mTORC1 activity in M2 macrophages compared to non-activated M0 macrophages.

The role of mitochondrial adaptations in metabolic and functional rearrangements in cancer cells was established. It was found that cells with the highest level of mitochondrial dysfunction were also characterized by the highest proliferation rate. However, we found that the proliferation rate did not correlate with mTORC1 activity in the studied cells.

We profiled colorectal cancer (CRC) cells according to their mitochondrial membrane potential (MMP). We clustered CRC cells into three bioenergetic groups: cells with high OXPHOS levels and relatively low glycolysis (cluster 1); an intermediate phenotype with reduced mitochondrial respiration and increased glycolysis (cluster 2); and a glycolytic phenotype with high glycolysis and minimal mitochondrial respiration (cluster 3). It was found that cells that prefer glycolysis tend to grow and proliferate rapidly. It was found that pharmaceutical compounds aimed at mitochondrial metabolism and homeostasis are more effective in cells with high OXPHOS levels.

It has been discovered that known and clinically approved pharmaceutical compounds that induce mitochondrial dysfunction in tumor-associated macrophages can be used for a new purpose - as potential anti-cancer drugs.

Education and personnel occupational retraining:

2 bachelors, 1 master, 2 highly qualified personnel, 1 candidate of biological sciences have been trained.

6 postgraduate students and 1 doctoral student are in the process of preparing their dissertations.

10 members of the research team have undergone advanced training on the topic of the project.

Cooperation:

  • Germany, Neuruppin, Brandenburg Medical School.
  • Germany, Marburg, Institute of Systems Immunology, Center for Tumor Biology and Immunology, Philipps University in Marburg.
  • Kazakhstan, Astana, Nazarbayev University School of Medicine.

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Karimova AF, Ketkar A, Suezov R, Khalitova AR, Gomzikova M, Mukhamedshina Y, Lauth M, Huber M, Simon HU, Brichkina A
In vitro functional assays to assess the reciprocal interplay between tumor cells and macrophages. FASEB J. 2024 Jul 15;38(13):e23730. doi: 10.1096/fj.202400240R. PMID: 38900063.
Sharapova, G.; Sabirova, S.; Gomzikova, M.; Brichkina, A.; Barlev, N.A.; Kalacheva, N.V.; Rizvanov, A.; Markov, N.; Simon, H.-U.
Mitochondrial Protein Density, Biomass, and Bioenergetics as Predictors for the Efficacy of Glioma Treatments. Int. J. Mol. Sci. 2024, 25, 7038. https://doi.org/10.3390/ijms25137038
Daks A, Shuvalov O, Fedorova O, Parfenyev S, Simon HU, Barlev NA.
Methyltransferase Set7/9 as a Multifaceted Regulator of ROS Response. Int J Biol Sci. 2023 Apr 23;19(8):2304-2318. doi: 10.7150/ijbs.83158. PMID: 37215983; PMCID: PMC10197882.
Brichkina A, Simon HU.
A novel role for mitochondrial fission in macrophages: trained innate immunity induced by beta-glucan. Cell Mol Immunol. 2023 Aug;20(8):864-866. doi: 10.1038/s41423-023-01017-w. Epub 2023 Apr 17. PMID: 37069227; PMCID: PMC10387469.
Klapan K, Simon D, Karaulov A, Gomzikova M, Rizvanov A, Yousefi S, Simon HU.
Autophagy and Skin Diseases. Front Pharmacol. 2022 Feb 18;13:844756. doi: 10.3389/fphar.2022.844756. PMID: 35370701; PMCID: PMC8971629.
Stojkov D, Gigon L, Peng S, Lukowski R, Ruth P, Karaulov A, Rizvanov A, Barlev NA, Yousefi S, Simon HU.
Physiological and Pathophysiological Roles of Metabolic Pathways for NET Formation and Other Neutrophil Functions. Front Immunol. 2022 Feb 9;13:826515. doi: 10.3389/fimmu.2022.826515. PMID: 35251008; PMCID: PMC8889909.
Idrisova KF, Simon HU, Gomzikova MO.
Role of Patient-Derived Models of Cancer in Translational Oncology. Cancers (Basel). 2022 Dec 26;15(1):139. doi: 10.3390/cancers15010139. PMID: 36612135; PMCID: PMC9817860.
Patent for invention "Method for selection of drugs for implementation of pharmacological induction of mitochondrial dysfunction in macrophages for antitumor therapy"
Brichkina Anna Igorevna, Mullakhmetova Adelya Faritovna, Gomzikova Marina Olegovna, Rizvanov Albert Anatolyevich, Simon Hans-Uwe. Application filed 05/02/2023, patent validity period 05/02/2043
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