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Contract number
075-15-2022-1128
Time span of the project
2022-2024

As of 01.12.2023

40
Number of staff members
11
scientific publications
3
Objects of intellectual property
General information

Name of the project: Molecular design of redox-active heterocyclic systems - new antitumor agents

Research directions: Chemistry and chemical technology

Goals and objectives

Goals of project:

Developing a new methodology for the design of redox-active molecular systems, determining the correlation between their structure and properties, establishing the mechanisms of the antitumor action of such systems and creating highly efficient antitumor agents.

Project objective:

  1. Creating a world-class interdisciplinary laboratory that will feature highly-qualified professionals in the field of organic, elemento-organic chemistry, biochemistry, biology and pharmacology. The laboratory will be aimed at solving problems of the molecular design of new highly-efficient antitumor agents.
  2. Developing methods of the synthesis of new types of redox-active molecular systems that will include as a basis sterically hindered phenols that have a phosphorus-containing functional group that is responsible for the stability and redox-activity of generated methylene quinone, as well as an aza-heterocyclic substituents as a pH-sensitive component. Studying their physical and chemical properties (reduction-oxidation potential, photosensitivity etc.).
  3. Developing methods for synthesizing pH-sensitive phosphorus-containing sterically hindered phenols (SHPs) that have additional fragments in the molecules, particularly, derivatives of benzofuroxan, isatin, dibenzo xanthene («hybrid» SHPs) capable of interacting with DNA as well as «vector» groups providing selective binding to DNA and (or) pathological proteins of a tumor cell; studying their physical and chemical properties (redox potential, photosensitivity etc.)
  4. The research of the potential antitumor activity of the produced compounds will include: a study of the cytotoxic profile on a panel of normal and tumor cell lines and determining the selectivity of their action; determining the mechanisms of cytotoxic action on the basis of an understanding of the pathological processes in oncogenesis; conducting an analysis of the «structure-activity» correlation to determine leading compounds for the study of antitumor activity in vivo using experimental model animals with grafted tumor. Moreover, on the basis of the accumulated data we will optimize the structures of synthesized compounds to achieve the highest selectivity and biological effect. Since many antitumor agents whose action is based on interaction with DNA (antineoplastic agents, cytostatics) also demonstrate antimicrobial capabilities, we will additionally study the antibacterial and antifungal activity of the produced compounds, including against resistant strains of microorganisms that pose serious danger to people all over the world.
The practical value of the study

Scientific results:

  1. An approach to the design of potential antitumor pharmacological drug candidates has been developed, which consists of using a modified concept of prodrugs, creating prerequisites for targeted action and combining several pharmacophore fragments in one molecule.
  2. A large-scale synthesis of target polypharmacophore compounds containing sterically hindered phenol has been carried out, which under normal conditions at neutral pH have antioxidant activity and are able to protect the healthy microenvironment from oxidative stress, and under conditions of acidification of the environment, which is observed in tumors, are able to metabolize into highly toxic forms and lead to the death of tumor cells.
  3. The biological activity of the synthesized compounds was comprehensively studied in order to understand the mechanisms of the antitumor action of substances, including the ability to lead to mitochondrial degradation and induce apoptosis, inhibit glycolysis - the main metabolic pathway of the tumor and influence the redox balance of the cell. The leader compound, which has a multifunctional spectrum of antitumor action, was isolated and submitted for in vivo  testing using laboratory animals with transplantable tumors.

Education and personnel occupational retraining:

Laboratory staff: leading researcher Neganova M.E. and junior researcher Alexandrova Yu.R. completed an internship at the Federal State Budgetary Institution “National Medical Research Center named after V. A. Almazov” of the Ministry of Health of the Russian Federation, St. Petersburg, Russia on the topic “Modeling of tumor processes.”

Cooperation:

  • The Federal Research Center of Problems of Chemical Physics and Medicinal Chemistry of the Russian Academy of Sciences, Chernogolovka, Russia
  • Institute of Organic Chemistry named after N.D. Zelinsky Russian Academy of Sciences, Moscow, Russia
  • Institute of Physiologically Active Compounds of the Russian Academy of Science, Chernogolovka, Russia
  • Institute of Chemistry, Saint-Petersburg State University, Saint-Petersburg, Russia
  • N.N. Vorozhtsov Novosibirsk Institute of Organic Chemistry of Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russia

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Gazizov, A.S.; Smolobochkin, A. V; Rizbayeva, T.S.; Vatsadze, S.Z.; Burilov, A.R.; Sinyashin, O.G.; Alabugin, I. V
“Stereoelectronic Deprotection of Nitrogen”: Recovering Nucleophilicity with a Conformational Change. J. Org. Chem. 2023, doi:10.1021/acs.joc.3c00161
Gibadullina, E.; Neganova, M.; Aleksandrova, Y.; Nguyen, H.B.T.; Voloshina, A.; Khrizanforov, M.; Nguyen, T.T.; Vinyukova, E.; Volcho, K.; Tsypyshev, D.; et al.
Hybrids of Sterically Hindered Phenols and Diaryl Ureas: Synthesis, Switch from Antioxidant Activity to ROS Generation and Induction of Apoptosis. Int. J. Mol. Sci. 2023, 24, 12637. https://doi.org/10.3390/ijms241612637
Bogdanov, A.V.; Neganova, M.; Voloshina, A.; Lyubina, A.; Amerhanova, S.; Litvinov, I.A.; Tsivileva, O.; Akylbekov, N.; Zhapparbergenov, R.; Valiullina, Z.; et al.
Anticancer and Antiphytopathogenic Activity of Fluorinated Isatins and Their Water-Soluble Hydrazone Derivatives. Int. J. Mol. Sci. 2023, 24, 15119. https://doi.org/10.3390/ijms242015119.
Chugunova, E.; Gazizov, A.S.; Islamov, D.; Matveeva, V.; Burilov, A.; Akylbekov, N.; Dobrynin, A.; Zhapparbergenov, R.; Appazov, N.; Chabuka, B.K.; et al.
An Unusual Rearrangement of Pyrazole Nitrene and Coarctate Ring-Opening/Recyclization Cascade: Formal CH–Acetoxylation and Azide/Amine Conversion without External Oxidants and Reductants. Molecules 2023, 28, 7335.https://doi.org/10.3390/molecules28217335.
Sukocheva, O.A., Neganova, M.E., Aleksandrova, Y. et al.
Signaling controversy and future therapeutical perspectives of targeting sphingolipid network in cancer immune editing and resistance to tumor necrosis factor-α immunotherapy. Cell Commun Signal 22, 251 (2024). https://doi.org/10.1186/s12964-024-01626-6
Smolobochkin, A.; Niyazova, D.; Gazizov, A.; Syzdykbayev, M.; Voloshina, A.; Amerhanova, S.; Lyubina, A.; Neganova, M.; Aleksandrova, Y.; Babaeva, O.; et al.
Discovery of Di(het)arylmethane and Dibenzoxanthene Derivatives as Potential Anticancer Agents. Int. J. Mol. Sci. 2024, 25, 6724. https://doi.org/10.3390/ijms25126724
Patent for invention No. 2796810 “New sterically hindered phenols containing benzofuroxan fragments with antitumor activity”
Chugunova E.A., Burilov A.R., Gibadullina E.M., Voloshina A.D., Lyubina A. P., Amerkhanova S.K., Nguyen Hoang Bao Chan, Alabugin I.V., Matylitsky K.V.. Publ. 05/29/2023.
Patent for invention N2802016 “Fluorine-containing benzylated isatins with antitumor activity”
Bogdanov A.V., Burtseva E.A., Voloshina A.D., Lyubina A.P., Amerkhanova S.K., Mironov V.F.., Alabugin I.V., Publ. 08/22/2023
Patent for invention No. 2816105 “Fluorine-containing benzylated isatins”
Bogdanov A.V., Burtseva E.A., Voloshina A.D., Lyubina A.P., Amerkhanova S.K., Mironov V.F., Alabugin I.V., Publ. 03/26/2024
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